BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D05LP1|AL429051
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1792 0.0
>3x_Contig1553
Length = 8593
Score = 1792 bits (904), Expect = 0.0
Identities = 906/907 (99%)
Strand = Plus / Minus
Query: 5 atagattgtcagagatcataattatttcaaaggctccgtcgttaattgtgtactaatatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3936 atagattgtcagagatcataattatttcaaaggctccgtcgttaattgtgtactaatatg 3877
Query: 65 cctattccacctttgtatacttcttctgcaggggatttcagatccgacacattcacgata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3876 cctattccacctttgtatacttcttctgcaggggatttcagatccgacacattcacgata 3817
Query: 125 ccgacaaaagatttctggagccaagtgaccgatgcttcattgggagatactatcaattta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3816 ccgacaaaagatttctggagccaagtgaccgatgcttcattgggagatactatcaattta 3757
Query: 185 gaagatacagatacgtgttcattggaagctagattatctgacgagattcttggtggcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 gaagatacagatacgtgttcattggaagctagattatctgacgagattcttggtggcagg 3697
Query: 245 gttcacagtggcgagaaatcagagggtttgttttgcatgtcaacaacattggcaaaccaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3696 gttcacagtggcgagaaatcagagggtttgttttgcatgtcaacaacattggcaaaccaa 3637
Query: 305 atagctgtccgctcccacttgaatttcgcaccaccttactctgtactttgtgataaacga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3636 atagctgtccgctcccacttgaatttcgcaccaccttactctgtactttgtgataaacga 3577
Query: 365 gctcatatttttgttgatgaatgtgccgggattgcagtactttcccaagctttggtaatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 gctcatatttttgttgatgaatgtgccgggattgcagtactttcccaagctttggtaatg 3517
Query: 425 cctaccatggcaagtaacggctgttacttaacattggaagatataaaggagaattatgtc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 cctaccatggcaagtaacggctgttacttaacattggaagatataaaggagaattatgtc 3457
Query: 485 cctgacataggcgatatacacctagctccaacaagattaatatgcttggagaacaccttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 cctgacataggcgatatacacctagctccaacaagattaatatgcttggagaacaccttg 3397
Query: 545 catggtatgttgtttcctctgactgaacttcaaagaatcagcgactgggctcattcccaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 catggtatgttgtttcctctgactgaacttcaaagaatcagcgactgggctcattcccaa 3337
Query: 605 gacattaaaattcatctcgatggagcnagattgtggaatgctgccgccgccaccgccgcc 664
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3336 gacattaaaattcatctcgatggagcaagattgtggaatgctgccgccgccaccgccgcc 3277
Query: 665 gctaataattcctcttcggagtttgagactgaaatagaatacatgcaaaaagtgtcaaaa 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 gctaataattcctcttcggagtttgagactgaaatagaatacatgcaaaaagtgtcaaaa 3217
Query: 725 ttagtggactcagtctcgatctgtctttctaagtccatcggagcaccaattggttcagtg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 ttagtggactcagtctcgatctgtctttctaagtccatcggagcaccaattggttcagtg 3157
Query: 785 ttagtggggtcgtctcaattcatcaagaaagctaggcacatacagaaacaacaaggtggc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 ttagtggggtcgtctcaattcatcaagaaagctaggcacatacagaaacaacaaggtggc 3097
Query: 845 ggtataagacaagccgggtttatcactaagattgctaattactgtattgatctcaacttc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 ggtataagacaagccgggtttatcactaagattgctaattactgtattgatctcaacttc 3037
Query: 905 ccgaaca 911
|||||||
Sbjct: 3036 ccgaaca 3030
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5714
Number of Sequences: 1807
Number of extensions: 5714
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)